Daftar museum di Jawa
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Jakarta
sunting- Gedung Arsip Nasional
- Gedung Joang '45
- Gedung Mohammad Hoesni Thamrin
- Monumen Nasional
- Museum Bank Indonesia
- Museum Bank Mandiri
- Museum Fatahillah
- Museum Indonesia
- Museum Nasional Indonesia
- Museum Purna Bhakti Pertiwi
- Museum Sasmita Loka Ahmad Yani
- Museum Sasmitaloka Jenderal Besar DR. A.H. Nasution
- Museum Satria Mandala
- Museum Seni Rupa dan Keramik
- Museum Sumpah Pemuda
- Museum Taman Prasasti
- Museum Tekstil
- Museum Wayang
- Museum Kebangkitan Nasional
- Museum Sumpah Pemuda
- Museum Perumusan Naskah Proklamasi
- Museum Basoeki Abdullah
- Museum Wayang
- Museum Tekstil
- Museum Joang' 45
- Museum Bahari
- Museum Waspada Purbawisesa
- Museum Pancasila Sakti
- Museum Pusaka/Tosan Aji
- Museum Komodo
- Museum Penerangan
- Museum Telekomunikasi
- Museum Olahraga Nasional
- Museum Transportasi
- Museum Graha Widya Patra (Minyak dan Gas Bumi)
- Museum Perangko
- Museum Serangga
- Museum Asmat
- Museum Katedral
- Museum Burung
- Museum Pusat Peragaan IPTEK
- Museum Bait Al-Qur'an ( Istiqlal)
- Museum Padepokan Pencak Silat
- Museum Aquarium Air Tawar
- Museum Indonesia
- Museum Al-Qur'an
- Museum Manggala Wanabhakti
- Museum Listrik dan Energi Baru
- Museum Lukisan S. Sudjojono
- Museum Galeri Foto Jurnalistik Antara
- Museum Korp. Marinir (TNI-AL)
- Museum Bank Tabungan Negara
- Museum Pelita Harapan
- Museum Layang-layang
- Museum POLRI
- Museum di Tengah Kebun
- Museum Artha Suaka
- Museum Adam Malik
- Museum Reksa Artha
- Museum MPR / DPR – RI
- Museum Hakka Indonesia, TMII
- Museum Sejarah MK
- Museum Art Mon Decor
- Museum Galeri Melaka
- Museum Batik Nasional, TMII
- Museum Seni Galeri Nasional Indonesia
- Museum Pers Antara
- Museum Anatomy FK. UI
- Museum Tionghoa Indonesia, TMII
- Museum Yodding Hakka Indonesia, TMII
- Museum Batik Nasional, TMII
Banten
sunting- Museum Negeri Banten
- Museum Multatuli Lebak
- Museum Purbakala Banten Lama
Jawa Barat
sunting- Museum Talaga Manggung
- Gedung Merdeka
- Museum Geologi Bandung
- Museum Konferensi Asia Afrika
- Museum Sri Baduga
- Museum Wangsit Mandala Siliwangi
- Museum Prabu Geusan Ulun
- Museum Perjuangan Bogor
- Museum Keraton Kasepuhan
- Museum Virajati Seskoad
- Museum Pos Indonesia
- Museum Kalijati
- Museum Zoologi Bogor
- Museum Tanah
- Museum Etnobotani Indonesia
- Museum Palagan Perjuangan 1945 Bojong Kokosan
- Museum Barli
- Museum Popo Iskandar
- Monumen & Museum Peta
- Museum Linggarjati
- Museum Joang' 45
- Museum Situs Cipari
- Museum Pangeran Cakrabuana
- Museum Site Kepurbakalaan
- Museum Gedung Pusaka Keraton Kanoman
- Museum Site Museum Batujaya
- Museum Daerah Kabupaten Subang
- Museum Tambaksari
- Museum Perjuangan Rakyat Jawa Barat
- Museum Daerah Kab. Cirebon
- Museum Nyamuk
- Museum Alit Leluhur Sukapura Kabupaten Tasikmalaya
- Museum Amerta Dirgantara Mandala Lanud Suryadarma
- Museum Kepresidenan "Balai Kirti"
- Museum Istana Kepresidenan Yogyakarta atau Gedung Agung
- Museum Sejarah Etnis Tionghoa
- Museum Puspa Iptek
- Herbarium Bogoriensi Museum
- Museum Mobil & Keramik Sentul
- Museum Sejarah Sunda Prabu Siliwangi
Jawa Tengah
sunting- Museum Dieng Kailasa
- Museum Fosil Sangiran
- Museum Kartini
- Museum Kereta Api Ambarawa
- Museum Kretek
- Museum Masjid Agung Demak
- Museum Wayang Sendang Mas
- Museum Samudra Raksa
- Surakarta
- Museum Keraton Surakarta, MUSEUM SUAKA BUDAYA
- Museum Radya Pustaka
- Museum Lukis Dullah
- House of Danar Hadi (Museum Galeri Batik Kuno Danarhadi)
- Museum Pers Nasional, Jl. Gajah Mada No.59
- Museum Pura Mangkunegaran
- Lain-lain
- Museum Jawa Tengah Ranggawarsita
- Museum Rekor Dunia Indonesia
- Museum Grobogan
- Museum Mandala Bhakti
- Museum Isdiman (Palagan Ambarawa)
- Museum Gula
- Museum Bumi Putera 1912
- Museum Sudirman
- Museum Tosan Aji
- Museum Batik Kota Pekalongan
- Museum Sekolah
- Museum Bank Rakyat Indonesia
- Museum POLRI69
- Museum Jamu Nyonya Meneer
- Museum Jamu Jago
- Museum Kamar Pengabdian Pangeran Diponegoro
- Museum B P K
- Museum Maha Karmawibhangga
- Museum Pertanian
- Museum Kasunanan / Museum Suaka Budaya Kasunanan Surakarta
- Museum Soesilo Soedarman
- Museum Prof. Dr. R. Soegarda Poerbakawatja
- Museum Misi Muntilan Pusat Animasi Misioner (MMMPAM)
- Dieng Plateu Museum
- Museum Haji Widayat
- Museum Abirowo
- Museum Ki Diso
- Museum Uang Purbalingga
- Museum Wayang dan Artefak
- Museum Kailasa
- Museum Perkembangan Islam Jawa Tengah
- Museum Paviliun 5 Akademi Militer
- Museum Penyiaran RRI
- Museum Kars Indonesia
- Museum Jamu Hortus Medicus
- Museum Naladipa
Yogyakarta
sunting- Monumen Yogya Kembali
- Museum Batik Yogyakarta
- Museum Biologi
- Museum Dapur Tradisional (Sleman)
- Museum Dewantara Kirti Griya
- Museum Keraton
- Museum Monumen Yogya Kembali
- Museum Perjuangan Yogyakarta
- Museum Pusat TNI AD "Dharma Wiratama"
- Museum Pusat TNI AU "Dirgantara Mandala"
- Museum Seni Lukis Kontemporer Nyoman Gunarsa
- Museum Sonobudoyo
- Museum Tembi
- Museum Ullen Sentalu
- Museum Wayang Kekayon
- Museum Condrokiranan
- Museum Perjuangan
- Museum Biologi UGM
- Museum Benteng Yogyakarta
- Museum Puro Pakualaman
- Museum Geoteknologi Mineral UPN
- Museum Gembira Loka
- Museum Pahlawan Pancasila
- Museum Affandi
- Museum Pangeran Diponegoro
- Museum Kayu Wanagama
- Museum RS. Mata "DR. YAP"
- Monumen Museum Pergerakan Wanita Indonesia (Kowani)
- Museum Sasmita Loka Pangsar Sudirman
- Museum Bahari Yogyakarta
- Museum Sandi
- Museum Hamengkubuwono IX
- Museum Kereta Kencana
- Museum Lukisan
- De'mata Trick Eye Museum
- Museum Memorial Jenderal Besar H.M Soeharto
- Museum Gunungapi Merapi
- Museum Sisa Hartaku (Sleman)
- Museum Erupsi Gunung Merapi
- Museum Candi Prambanan
- Museum Anak Kolong Tangga
- Museum Situs Majapahit UGM
Jawa Timur
sunting- Museum Musik Indonesia
- Museum Negeri Mpu Tantular
- Museum Satwa
- Museum Trowulan
- Monumen Kapal Selam
- Museum Daerah Kambang Putih
- Museum Airlangga
- Museum Balai Penyelamat Tulung Agung
- Museum Sumenep
- Museum Pusat Informasi Majapahit Trowulan
- Museum Brawijaya Malang
- Museum Sunan Drajat
- Museum Trinil
- Museum Arca
- Museum TNI-AL, "Loka Jala Crana"
- Museum Sepuluh Nopember
- Museum Kesehatan dr. Adhyatma, MPH
- Museum Rajek Wesi (Pagor)
- Museum Ki Ageng Bonokeling
- Museum Anjuk Ladang
- Museum Penataran
- Balai Penyelamat Benda Purbakala "Mpu Purwa"
- Museum House Of Sampoerna
- Museum Sunan Giri
- Museum Blambangan
- Rumah Bersejarah Markas Gerilya Panglima Besar Jenderal Sudirman
- Museum Cakraningrat
- Museum Dapoer Roekijah Djawa
- Museum Pamekasan
- Museum Jawa Timur Park 2
- Museum Armada
- Museum Angkut Batu
- Museum HAM Omah Munir
- Museum Dirgantara A. Sulaksono
- Museum Probolinggo
- Museum Kesehatan FK Universitas Airlangga
- Museum Situs Trinil
- Museum Situs Semedo
- Museum Manusia Purba Klaster Ngebung
- Museum Manusia Purba Klaster Bukuran
- Museum Manusia Purba Manyarejo
- Museum Situs Dayu
- Museum Nahdatul Ulama
- Museum Rumah Wafat W.R. Supratman
- Museum OHD
- Museum P4
- Museum Gebang Blitar
- Museum Anatomi Tubuh (Kawasan Jawa Timur)
- Museum Semen Indonesia
- Museum Islam Nusantara
- Museum Tubuh The Bagong Adventure
- Museum Singashari
- Museum Surabaya
- Museum Musik Indonesia
- Museum Boemi Poeger - Kec. Kencong Kab. Jember